SELECT 
  cscart_products_categories.product_id, 
  GROUP_CONCAT(
    IF(
      cscart_products_categories.link_type = "M", 
      CONCAT(
        cscart_products_categories.category_id, 
        "M"
      ), 
      cscart_products_categories.category_id
    )
  ) AS category_ids, 
  product_position_source.position AS position 
FROM 
  cscart_products_categories 
  INNER JOIN cscart_categories ON cscart_categories.category_id = cscart_products_categories.category_id 
  AND cscart_categories.company_id = 1 
  AND (
    cscart_categories.usergroup_ids = '' 
    OR FIND_IN_SET(
      0, cscart_categories.usergroup_ids
    ) 
    OR FIND_IN_SET(
      1, cscart_categories.usergroup_ids
    )
  ) 
  AND cscart_categories.status IN ('A', 'H') 
  LEFT JOIN cscart_products_categories AS product_position_source ON cscart_products_categories.product_id = product_position_source.product_id 
  AND product_position_source.category_id = 369 
WHERE 
  cscart_products_categories.product_id IN (
    427, 408, 1971, 382, 418, 1959, 1930, 
    1960, 1961, 1931, 1529, 2001, 1465, 
    1932, 1962, 1933, 1935, 1958, 329, 439, 
    1969, 393, 394, 1929
  ) 
GROUP BY 
  cscart_products_categories.product_id

Query time 0.00729

JSON explain

{
  "query_block": {
    "select_id": 1,
    "cost_info": {
      "query_cost": "169.38"
    },
    "grouping_operation": {
      "using_temporary_table": true,
      "using_filesort": true,
      "cost_info": {
        "sort_cost": "14.07"
      },
      "nested_loop": [
        {
          "table": {
            "table_name": "cscart_categories",
            "access_type": "ALL",
            "possible_keys": [
              "PRIMARY",
              "c_status",
              "p_category_id"
            ],
            "rows_examined_per_scan": 115,
            "rows_produced_per_join": 2,
            "filtered": "2.00",
            "cost_info": {
              "read_cost": "27.56",
              "eval_cost": "0.46",
              "prefix_cost": "28.02",
              "data_read_per_join": "6K"
            },
            "used_columns": [
              "category_id",
              "company_id",
              "usergroup_ids",
              "status"
            ],
            "attached_condition": "((`eshopuga_upgr_4122`.`cscart_categories`.`company_id` = 1) and ((`eshopuga_upgr_4122`.`cscart_categories`.`usergroup_ids` = '') or find_in_set(0,`eshopuga_upgr_4122`.`cscart_categories`.`usergroup_ids`) or find_in_set(1,`eshopuga_upgr_4122`.`cscart_categories`.`usergroup_ids`)) and (`eshopuga_upgr_4122`.`cscart_categories`.`status` in ('A','H')))"
          }
        },
        {
          "table": {
            "table_name": "cscart_products_categories",
            "access_type": "ref",
            "possible_keys": [
              "PRIMARY",
              "pt"
            ],
            "key": "PRIMARY",
            "used_key_parts": [
              "category_id"
            ],
            "key_length": "3",
            "ref": [
              "eshopuga_upgr_4122.cscart_categories.category_id"
            ],
            "rows_examined_per_scan": 40,
            "rows_produced_per_join": 14,
            "filtered": "15.29",
            "index_condition": "(`eshopuga_upgr_4122`.`cscart_products_categories`.`product_id` in (427,408,1971,382,418,1959,1930,1960,1961,1931,1529,2001,1465,1932,1962,1933,1935,1958,329,439,1969,393,394,1929))",
            "cost_info": {
              "read_cost": "92.00",
              "eval_cost": "2.81",
              "prefix_cost": "138.42",
              "data_read_per_join": "225"
            },
            "used_columns": [
              "product_id",
              "category_id",
              "link_type"
            ]
          }
        },
        {
          "table": {
            "table_name": "product_position_source",
            "access_type": "eq_ref",
            "possible_keys": [
              "PRIMARY",
              "pt"
            ],
            "key": "PRIMARY",
            "used_key_parts": [
              "category_id",
              "product_id"
            ],
            "key_length": "6",
            "ref": [
              "const",
              "eshopuga_upgr_4122.cscart_products_categories.product_id"
            ],
            "rows_examined_per_scan": 1,
            "rows_produced_per_join": 14,
            "filtered": "100.00",
            "cost_info": {
              "read_cost": "14.07",
              "eval_cost": "2.81",
              "prefix_cost": "155.31",
              "data_read_per_join": "225"
            },
            "used_columns": [
              "product_id",
              "category_id",
              "position"
            ]
          }
        }
      ]
    }
  }
}

Result

product_id category_ids position
329 342,375,369,356,352,370,355,358,353,372,350,339,371,354,357,374,373,351,338,378,376,349M,377 0
382 374,373,351,344,338,378,376,349,377,382,340,342,383,375,386,369,379,384,341,356,352,370,355,358,353,345,337M,343,372,350,339,371,354,381,385,347,357 0
393 381,385,347,357,374,373,351,344,338,378,376,349,377,382,340,342,383,375,386,369,379,384,341,356,380,352,370,355,358,353,345,337M,343,372,350,339,371,354 0
394 337M,343,372,350,339,371,354,381,385,347,357,374,373,351,344,338,378,376,349,377,382,340,342,383,375,386,369,379,384,341,356,380,352,370,355,358,353,345 0
408 355,358,353,345,337M,343,372,350,339,371,354,381,385,347,357,374,373,351,344,338,378,376,349,377,382,340,342,383,375,386,369,379,384,341,356,380,352,370 0
418 356,352,370,355,358,353,345,337M,343,372,350,339,371,354,357,374,373,351,344,338,378,376,349,377,363,340,342,375,369,341 0
427 340,342,375,380,369,341,356,352,370,355,358,353,345,337M,381,343,385,372,350,339,371,347,354,357,382,374,373,351,344,383,338,378,376,349,377,386,379,384 0
439 351,344,383,338,378,376,349,377,386,379,384,361,360,340,342,359,375,369,341,362,352,370,355,358,353,345,337M,381,343,385,372,350,339,371,354,357,368,382,374,363,373 0
1465 394,357,368,382,374,363,373,351,344,383,338,378,376,349,377,380,386,392,379,384,390,361M,360,340,342,359,356,375,369,341,362,393,396,352,370,355,358,388,353,345,347,337,381,395,343,385,391,372,350,339,371,354 0
1529 372,350,339,371,354,394,357,368,374,363,373,351,344,338,378,376,349M,377,380,386,392,379,384,390,361,360,340,342,359,356,375,369,341,362,393,396,352,370,355,358,388,353,345,347,337,381,395,343,385,391 0
1929 388,345,337,381,391,350,339,363M,373,338,349,377,379,390,359,369,352 0
1930 353,352,395,388,345,354,337,381,391,350,339,351,376,361M,363,340,338,356,349,377,375,379,390,341,362,359,369,355 0
1931 369,385,372,353,371,395,388,345,337,374,381,391,350,339,380,360,342,376,361M,363,340,338,349,379,390,396,362,359 0
1932 349,379,390,362M,359,369,352,394,388,345,378,381,384,391,350,339,377,338 0
1933 396,355,338,349,379,390,362,359,372,369,352,394,386,337,374,388,345,381,360,391,350,339,376,361M,363,341,370,340 0
1935 361M,363,340,338,349,379,390,362,359,395,344,372,369,352,394,380,337,374,384,342,388,345,393,381,360,391,350,339,376 0
1958 377,381,360,370,339,361M,363,340,368,338,349,379,362,359,369,352,337,388 0
1959 337,350,377,381,360,370,339,361M,363,340,368,338,349,379,362,359,369,352 0
1960 352,337,377,381,360,370,339,361M,363,340,378,368,338,349,379,362,359,369 0
1961 362,359,369,350,337,377,381,360,370,339,361M,363,340,378,368,338,349,379 0
1962 338,349,388,379,352,362,359,369,350,337,390,377,381,360,370,339,361M,363,340 0
1969 361M,363,368,340,338,349,379,352,362,359,369,350,337,381,360,370,339 0
1971 360,370,339,361M,363,368,340,338,349,379,352,362,359,369,350,377,337,381 0
2001 391,396M,363,338,349,362,390,369 0